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Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45
Sequence Clustering and Redundancy Reduction Results
3U4E
Sequence Clusters for the Sequence Entities in PDB 3U4E
Entity #1: Chains: G,J - V1V2 region of HIV-1 on 1FD6 scaffold protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 37399
95% 1 1 28137
90% 1 1 27009
70% 2 4 8159
50% 2 4 7450
40% 2 4 6873
30% 2 4 6117
Entity #2: Chains: A,H - PG9 Heavy Chain protein, length: 248 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 16426
95% 2 4 5625
90% 2 4 5626
70% 487 1682 1
50% 1001 3477 1
40% 1002 3478 1
30% 1097 4103 1
Entity #3: Chains: B,L - PG9 Light Chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 7227
95% 2 5 5144
90% 12 49 310
70% 89 280 17
50% 1002 3477 1
40% 1003 3478 1
30% 1098 4103 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.