Sequence Similarity Clusters for the Entities in PDB 3U46

Entity #1 | Chains: A,H
CH04 Heavy chain Fab protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10088
95 % 2 4 10099 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 2 4 9984
70 % 1593 2197 1
50 % 3297 4537 1
40 % 3297 4537 1
30 % 3881 5342 1
Entity #2 | Chains: B,L
CH02 Light chain Fab protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26879
95 % 1 3 12042 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 497 683 3
70 % 1357 1841 2
50 % 3298 4537 1
40 % 3298 4537 1
30 % 3882 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.