Sequence Similarity Clusters for the Entities in PDB 3U41

Entity #1 | Chains: A,B,C,D,E,F,G,H
Twin-arginine leader-binding protein dmsD protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 3887
95 % 3 3 4662 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 3 3 4679
70 % 4 4 4288
50 % 4 4 4131
40 % 4 4 3942
30 % 4 4 3634

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.