Sequence Similarity Clusters for the Entities in PDB 3U41

Entity #1 | Chains: A,B,C,D,E,F,G,H
Twin-arginine leader-binding protein dmsD protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4777
95 % 3 3 5094 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 3 3 5119
70 % 4 4 4618
50 % 4 4 4434
40 % 4 4 4181
30 % 4 4 3780

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures