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Crystal Structure of Bacillus thuringiensis PlcR in complex with the peptide PapR7 and DNA
Sequence Clustering and Redundancy Reduction Results
3U3W
Sequence Clusters for the Sequence Entities in PDB 3U3W
Entity #1: Chains: A,B - Transcriptional activator PlcR protein protein, length: 293 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 6753
95% 1 3 7108
90% 1 3 7062
70% 1 3 6824
50% 1 3 6257
40% 1 3 5811
30% 1 3 5183
Entity #2: Chains: P,Q - C-terminus heptapeptide from PapR protein protein, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: Y - 5'-D(P*CP*TP*AP*TP*GP*CP*AP*AP*TP*AP*TP*TP*TP*CP*AP*TP*AP*T)-3' dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: Z - 5'-D(P*AP*TP*AP*TP*GP*AP*AP*AP*TP*AP*TP*TP*GP*CP*AP*TP*AP*G)-3' dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.