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Crystal Structure of Bacillus thuringiensis PlcR in complex with the peptide PapR7 and DNA
Sequence Clustering and Redundancy Reduction Results
3U3W
Sequence Clusters for the Sequence Entities in PDB 3U3W
Entity #1: Chains: A,B - Transcriptional activator PlcR protein protein, length: 293 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 6563
95% 1 3 6941
90% 1 3 6902
70% 1 3 6679
50% 1 3 6136
40% 1 3 5696
30% 1 3 5074
Entity #2: Chains: P,Q - C-terminus heptapeptide from PapR protein protein, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: Y - 5'-D(P*CP*TP*AP*TP*GP*CP*AP*AP*TP*AP*TP*TP*TP*CP*AP*TP*AP*T)-3' dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: Z - 5'-D(P*AP*TP*AP*TP*GP*AP*AP*AP*TP*AP*TP*TP*GP*CP*AP*TP*AP*G)-3' dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.