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Crystal Structure of Bacillus thuringiensis PlcR in complex with the peptide PapR7 and DNA
Sequence Clustering and Redundancy Reduction Results
3U3W
Sequence Clusters for the Sequence Entities in PDB 3U3W
Entity #1: Chains: A,B - Transcriptional activator PlcR protein protein, length: 293 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 6687
95% 1 3 7050
90% 1 3 7006
70% 1 3 6774
50% 1 3 6213
40% 1 3 5773
30% 1 3 5144
Entity #2: Chains: P,Q - C-terminus heptapeptide from PapR protein protein, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: Y - 5'-D(P*CP*TP*AP*TP*GP*CP*AP*AP*TP*AP*TP*TP*TP*CP*AP*TP*AP*T)-3' dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: Z - 5'-D(P*AP*TP*AP*TP*GP*AP*AP*AP*TP*AP*TP*TP*GP*CP*AP*TP*AP*G)-3' dna, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.