Sequence Similarity Clusters for the Entities in PDB 3U36

Entity #1 | Chains: A,C,E,H
PG9 Fab heavy chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 18938
95 % 4 4 6441
90 % 4 4 6431
70 % 1748 2064 1
50 % 3618 4268 1
40 % 3618 4268 1
30 % 4277 5034 1
Entity #2 | Chains: B,D,F,L
PG9 Fab light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 8438
95 % 4 5 5890
90 % 47 52 334
70 % 292 359 10
50 % 3619 4268 1
40 % 3619 4268 1
30 % 4278 5034 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.