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Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Sequence Clustering and Redundancy Reduction Results
3U2S
Sequence Clusters for the Sequence Entities in PDB 3U2S
Entity #1: Chains: A,H - PG9 heavy chain protein, length: 248 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 16072
95% 1 4 5510
90% 1 4 5515
70% 135 1622 2
50% 275 3355 1
40% 275 3356 1
30% 300 3971 1
Entity #2: Chains: B,L - PG9 light chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 7079
95% 1 5 5046
90% 2 48 307
70% 28 264 17
50% 276 3355 1
40% 276 3356 1
30% 301 3971 1
Entity #3: Chains: C,G - Envelope glycoprotein gp120 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 23116
95% 1 2 19283
90% 1 2 18713
70% 1 3 10956
50% 1 3 9835
40% 1 3 8980
30% 1 3 7846
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.