Sequence Similarity Clusters for the Entities in PDB 3U2S

Entity #1 | Chains: A,H
PG9 heavy chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 17740
95 % 1 4 6041
90 % 1 4 6035
70 % 164 1894 1
50 % 334 3902 1
40 % 334 3903 1
30 % 361 4631 1
Entity #2 | Chains: B,L
PG9 light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 7848
95 % 1 5 5531
90 % 2 51 315
70 % 28 328 13
50 % 335 3902 1
40 % 335 3903 1
30 % 362 4631 1
Entity #3 | Chains: C,G
Envelope glycoprotein gp120 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25473
95 % 1 3 12997
90 % 1 3 12758
70 % 1 4 8785
50 % 1 4 8013
40 % 1 4 7378
30 % 1 4 6550

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.