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Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Sequence Clustering and Redundancy Reduction Results
3U2S
Sequence Clusters for the Sequence Entities in PDB 3U2S
Entity #1: Chains: A,H - PG9 heavy chain protein, length: 248 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 16426
95% 1 4 5625
90% 1 4 5626
70% 143 1682 1
50% 291 3477 1
40% 291 3478 1
30% 316 4103 1
Entity #2: Chains: B,L - PG9 light chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 7227
95% 1 5 5144
90% 2 49 310
70% 28 280 17
50% 292 3477 1
40% 292 3478 1
30% 317 4103 1
Entity #3: Chains: C,G - Envelope glycoprotein gp120 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 23596
95% 1 3 12042
90% 1 3 11827
70% 1 4 8159
50% 1 4 7450
40% 1 4 6873
30% 1 4 6117
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.