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Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Sequence Clustering and Redundancy Reduction Results
3U2S
Sequence Clusters for the Sequence Entities in PDB 3U2S
Entity #1: Chains: A,H - PG9 heavy chain protein, length: 248 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14933
95% 1 3 6724
90% 1 3 6677
70% 118 1480 2
50% 241 3070 1
40% 241 3071 1
30% 263 3629 1
Entity #2: Chains: B,L - PG9 light chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 6510
95% 1 4 5702
90% 2 21 676
70% 23 238 16
50% 242 3070 1
40% 242 3071 1
30% 264 3629 1
Entity #3: Chains: C,G - Envelope glycoprotein gp120 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 21530
95% 1 2 18052
90% 1 2 17527
70% 1 3 10290
50% 1 3 9241
40% 1 3 8439
30% 1 3 7415
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.