Sequence Similarity Clusters for the Entities in PDB 3U2S

Entity #1 | Chains: A,H
PG9 heavy chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 17476
95 % 1 4 5961
90 % 1 4 5954
70 % 159 1846 1
50 % 324 3804 1
40 % 324 3805 1
30 % 351 4512 1
Entity #2 | Chains: B,L
PG9 light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 7723
95 % 1 5 5453
90 % 2 51 313
70 % 28 324 14
50 % 325 3804 1
40 % 325 3805 1
30 % 352 4512 1
Entity #3 | Chains: C,G
Envelope glycoprotein gp120 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25129
95 % 1 3 12776
90 % 1 3 12539
70 % 1 4 8636
50 % 1 4 7881
40 % 1 4 7263
30 % 1 4 6451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.