Sequence Similarity Clusters for the Entities in PDB 3U2S

Entity #1 | Chains: A,H
PG9 heavy chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 18255
95 % 1 4 6208
90 % 1 4 6199
70 % 171 1952 1
50 % 348 4026 1
40 % 348 4028 1
30 % 375 4764 1
Entity #2 | Chains: B,L
PG9 light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 8086
95 % 1 5 5684
90 % 2 52 321
70 % 29 344 11
50 % 349 4026 1
40 % 349 4028 1
30 % 376 4764 1
Entity #3 | Chains: C,G
Envelope glycoprotein gp120 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26178
95 % 1 3 13334
90 % 1 3 13096
70 % 1 4 9037
50 % 1 4 8235
40 % 1 4 7570
30 % 1 4 6700

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.