Sequence Similarity Clusters for the Entities in PDB 3U2S

Entity #1 | Chains: A,H
PG9 heavy chain protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19257
95 % 1 4 6580
90 % 1 4 6564
70 % 188 2111 1
50 % 385 4367 1
40 % 385 4367 1
30 % 413 5151 1
Entity #2 | Chains: B,L
PG9 light chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 8602
95 % 1 5 6030
90 % 2 64 281
70 % 32 382 9
50 % 386 4367 1
40 % 386 4367 1
30 % 414 5151 1
Entity #3 | Chains: C,G
Envelope glycoprotein gp120 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27600
95 % 1 3 14042
90 % 1 3 13789
70 % 1 4 9501
50 % 1 4 8640
40 % 1 4 7912
30 % 1 4 6976

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.