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Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Sequence Clustering and Redundancy Reduction Results
3U2S
Sequence Clusters for the Sequence Entities in PDB 3U2S
Entity #1: Chains: A,H - PG9 heavy chain protein, length: 248 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 15612
95% 1 3 7020
90% 1 3 6972
70% 125 1535 2
50% 255 3184 1
40% 255 3185 1
30% 277 3767 1
Entity #2: Chains: B,L - PG9 light chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 6833
95% 1 4 5988
90% 2 47 307
70% 24 249 18
50% 256 3184 1
40% 256 3185 1
30% 278 3767 1
Entity #3: Chains: C,G - Envelope glycoprotein gp120 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 22432
95% 1 2 18747
90% 1 2 18184
70% 1 3 10678
50% 1 3 9591
40% 1 3 8754
30% 1 3 7667
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.