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An Information Portal to 105025 Biological Macromolecular Structures

Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Sequence Clustering and Redundancy Reduction Results
3U2S
Sequence Clusters for the Sequence Entities in PDB 3U2S
Entity #1: Chains: A,H - PG9 heavy chain protein, length: 248 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 15188
95% 1 3 6843
90% 1 3 6796
70% 121 1496 2
50% 247 3102 1
40% 247 3103 1
30% 269 3671 1
Entity #2: Chains: B,L - PG9 light chain protein, length: 216 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 6622
95% 1 4 5809
90% 2 46 301
70% 23 244 16
50% 248 3102 1
40% 248 3103 1
30% 270 3671 1
Entity #3: Chains: C,G - Envelope glycoprotein gp120 protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 21876
95% 1 2 18336
90% 1 2 17800
70% 1 3 10439
50% 1 3 9382
40% 1 3 8559
30% 1 3 7513
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.