Sequence Similarity Clusters for the Entities in PDB 3U1S

Entity #1 | Chains: L
Fab PGT145 Light chain protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28283
95 % 1 3 23580
90 % 1 3 22855
70 % 940 2474 1
50 % 1921 5011 1
40 % 1921 5011 1
30 % 2198 5941 1
Entity #2 | Chains: H
Fab PGT145 Heavy chain protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27905
95 % 1 3 23324
90 % 1 3 22622
70 % 927 2424 2
50 % 1922 5011 1
40 % 1922 5011 1
30 % 2199 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures