Sequence Similarity Clusters for the Entities in PDB 3U1S

Entity #1 | Chains: L
Fab PGT145 Light chain protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27711
95 % 1 3 23129
90 % 1 3 22430
70 % 900 2392 1
50 % 1840 4843 1
40 % 1840 4843 1
30 % 2075 5705 1
Entity #2 | Chains: H
Fab PGT145 Heavy chain protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27337
95 % 1 3 22875
90 % 1 3 22201
70 % 887 2342 2
50 % 1841 4843 1
40 % 1841 4843 1
30 % 2076 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures