Sequence Similarity Clusters for the Entities in PDB 3U1Q

Entity #1 | Chains: A,B
Mycobacteria Tuberculosis LD-transpeptidase type 2 protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 3443
95 % 10 13 2596 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 10 13 2652
70 % 10 13 2640
50 % 10 13 2620
40 % 10 13 2579
30 % 10 13 2451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures