Sequence Similarity Clusters for the Entities in PDB 3U1P

Entity #1 | Chains: A,B
Mycobacteria Tuberculosis LD-transpeptidase type 2 protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 3264
95 % 13 13 2466 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 13 13 2521
70 % 13 13 2508
50 % 13 13 2494
40 % 13 13 2461
30 % 13 13 2348

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.