Sequence Similarity Clusters for the Entities in PDB 3U0N

Entity #1 | Chains: A
mRuby protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27208
95 % 2 3 22734
90 % 2 3 22056
70 % 5 39 352
50 % 28 188 19
40 % 30 194 21
30 % 136 489 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3E5T 1 A Red fluorescent protein eqFP611 6118
2 3PIB 1 A, B, C, D eqFP578 fluorescent protein 6118
3 3U0L 1 A mRuby 6118
4 3NT3 1 A, B, C, D LSSmKate2 red fluorescent protein 32630
5 3U0N 1 A mRuby 6118
6 3IP2 1 A Neptune red fluorescent protein 6118
7 4EDS 1 A, B far-red fluorescent protein eqFP650 6118
8 3PJ5 1 A, B Red fluorescent protein eqFP578 6118
9 3U0M 1 A mRuby 6118
10 4OJ0 1 A, B, C, D Fluorescent protein FP480 6118
11 4KPI 1 A Reversibly photoswitchable red fluorescent protein rsTagRFP 32630
12 3E5W 1 A, B, C, D Red fluorescent protein eqFP611 6118
13 3PJB 1 A, B Red fluorescent protein eqFP578 6118
14 3BXA 1 A, B Far-red fluorescent protein mKate 6118
15 3U8A 1 A, B, C, D Fluorescent protein rsTagRFP 32630
16 3SVS 1 A, B, C, D, E, F, G, H mKate S158A/S143C 32630
17 4EDO 1 A, B far-red fluorescent protein eqFP650 6118
18 3SVN 1 A, B, C, D mKate 32630
19 3BX9 1 A, B Far-red fluorescent protein mKate 6118
20 3PJ7 1 A, B, C, D Red fluorescent protein eqFP578 6118
21 3SVR 1 A, B, C, D mkate S158A/S143C 32630
22 3SVO 1 A, B, C, D mKate S158A/S143C 32630
23 5JVA 1 A, B, C, D TagRFP-T 32630
24 3H1O 1 A, B Fluorescent protein FP480 6118
25 3NT9 1 A, B, C, D LSSmKate1 red fluorescent protein 32630
26 3U8C 1 A, B, C, D Fluorescent protein rsTagRFP 32630
27 3M22 1 A, B, C, D TagRFP 32630
28 3M24 1 A, B, C, D TagBFP 32630
29 3E5V 1 A Red fluorescent protein eqFP611 6118
30 1UIS 1 A, B red fluorescent protein FP611 6118
31 4KGE 1 A, B TagRFP675, red fluorescent protein 32630
32 4KGF 1 A, B TagRFP675, red fluorescent protein 32630
33 4OQW 1 A, B, C, D, E, F, G, H Fluorescent protein FP480 6118
34 5BQL 1 A, B, C, D Fluorescent protein cyOFP 562
35 3BXB 1 A, B, C, D, E, F, G, H Far-red fluorescent protein mKate 6118
36 4NWS 1 A, B fluorescent protein 32630
37 3H1R 1 A Fluorescent protein FP480 6118
38 3SVU 1 A, B, C, D mkate S143C 32630
39 3BXC 1 A, B, C, D, E, F, G, H Far-red fluorescent protein mKate 6118