Sequence Similarity Clusters for the Entities in PDB 3TWH

Entity #1 | Chains: A
Ribonuclease H protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 16 1484
95 % 14 23 1437
90 % 14 23 1471
70 % 14 23 1501
50 % 14 23 1545
40 % 14 23 1565
30 % 14 23 1533
Entity #2 | Chains: B
RNA (5'-R(*UP*CP*GP*AP*CP*A)-3') rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA (5'-D(*AP*TP*(SDG)P*TP*CP*(SDG))-3') dna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.