Sequence Similarity Clusters for the Entities in PDB 3TPI

Entity #1 | Chains: Z
TRYPSINOGEN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 324 383 39
95 % 367 442 30 Flexibility: No
Max RMSD: 2.7, Avg RMSD: 0.4
PDBFlex
90 % 367 442 32
70 % 411 526 19
50 % 460 677 13
40 % 916 1669 4
30 % 980 1811 6
Entity #2 | Chains: I
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 44 295
95 % 52 90 232 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.6
PDBFlex
90 % 57 95 236
70 % 71 115 173
50 % 80 148 170
40 % 82 162 171
30 % 82 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.