Sequence Similarity Clusters for the Entities in PDB 3TPI

Entity #1 | Chains: Z
TRYPSINOGEN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 347 412 39
95 % 390 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 390 471 20
70 % 435 557 19
50 % 484 708 14
40 % 1013 1864 4
30 % 1020 1886 6
Entity #2 | Chains: I
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 44 380
95 % 52 90 261 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 57 95 265
70 % 71 115 179
50 % 80 149 187
40 % 82 163 183
30 % 82 163 195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures