Sequence Similarity Clusters for the Entities in PDB 3TPI

Entity #1 | Chains: Z
TRYPSINOGEN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 354 427 44
95 % 388 473 32 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 388 473 35
70 % 433 561 20
50 % 482 713 15
40 % 1024 1900 4
30 % 1030 1914 7
Entity #2 | Chains: I
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 42 73 253
95 % 56 94 257 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 65 103 247
70 % 79 123 182
50 % 88 157 191
40 % 90 172 185
30 % 90 172 204

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures