Sequence Similarity Clusters for the Entities in PDB 3TPD

Entity #1 | Chains: A
Serine/threonine-protein kinase HipA protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 3808
95 % 2 13 3601 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.8
PDBFlex
90 % 2 13 3674
70 % 2 13 3604
50 % 2 13 3524
40 % 2 13 3366
30 % 2 16 2492

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures