Sequence Similarity Clusters for the Entities in PDB 3TIH

Entity #1 | Chains: A,B,C,D
HIV-1 clade C ZM109F.PB4 gp120 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18528
95 % 1 1 16606 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 16277
70 % 121 126 178
50 % 121 126 223
40 % 121 126 240
30 % 122 129 248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.