Sequence Similarity Clusters for the Entities in PDB 3TIH

Entity #1 | Chains: A,B,C,D
HIV-1 clade C ZM109F.PB4 gp120 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19455
95 % 1 1 17345 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 17002
70 % 125 130 184
50 % 125 130 225
40 % 125 130 242
30 % 126 133 251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures