Sequence Similarity Clusters for the Entities in PDB 3TIH

Entity #1 | Chains: A,B,C,D
HIV-1 clade C ZM109F.PB4 gp120 protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19171
95 % 1 1 17112 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 16778
70 % 124 129 184
50 % 124 129 226
40 % 124 129 245
30 % 125 132 251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures