Sequence Similarity Clusters for the Entities in PDB 3TGT

Entity #1 | Chains: A
HIV-1 clade A/E 93TH057 gp120 protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 29 1004
95 % 8 55 558 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 8 55 593
70 % 13 126 178
50 % 13 126 223
40 % 13 126 240
30 % 13 129 248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.