Sequence Similarity Clusters for the Entities in PDB 3TGS

Entity #1 | Chains: A,B
HIV-1 clade C1086 gp120 core protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 8293
95 % 3 9 4032 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 3 9 4070
70 % 89 129 182
50 % 89 129 223
40 % 89 129 241
30 % 89 132 248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures