Sequence Similarity Clusters for the Entities in PDB 3TGR

Entity #1 | Chains: A,B
HIV-1 clade C1086 gp120 protein, length: 358 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 8155
95 % 2 9 3973 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 9 4011
70 % 86 127 179
50 % 86 127 224
40 % 86 127 244
30 % 86 130 249

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.