Sequence Similarity Clusters for the Entities in PDB 3TCL

Entity #1 | Chains: A,H
CH04 Heavy Chain Fab protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10003
95 % 1 4 10013 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 1 4 9897
70 % 373 2172 1
50 % 763 4489 1
40 % 763 4489 1
30 % 826 5290 1
Entity #2 | Chains: B,L
CH04 Light Chain Fab protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20421
95 % 1 2 17770 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 108 676 3
70 % 309 1822 2
50 % 764 4489 1
40 % 764 4489 1
30 % 827 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3TCL 2 B, L CH04 Light Chain Fab 9606
2 5ESZ 2 B, L CH04 Light Chain 9606