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Crystal Structure of HIV-1 Neutralizing Antibody CH04
Sequence Clustering and Redundancy Reduction Results
3TCL
Cluster # 11193 Members. Sequence cutoff: 95% Cluster size: 3 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
Select for download / view details OR: Select two chains for comparison
  Download      Details  
1 3TCL 1 A, H CH04 Heavy Chain Fab 9606  
2 3U46 1 A, H CH04 Heavy chain Fab 9606  
3 3U4B 1 H CH04 Heavy chain 9606  
 
Sequence Clusters for the Sequence Entities in PDB 3TCL
Entity #1: Chains: A,H - CH04 Heavy Chain Fab protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 11731
95% 1 3 11193
90% 1 3 11029
70% 260 1564 2
50% 529 3242 1
40% 529 3243 1
30% 574 3827 1
Entity #2: Chains: B,L - CH04 Light Chain Fab protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 31983
95% 1 1 24555
90% 57 389 5
70% 216 1361 3
50% 530 3242 1
40% 530 3243 1
30% 575 3827 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.