POP-OUT | CLOSE
 
Crystal Structure of HIV-1 Neutralizing Antibody CH04
Sequence Clustering and Redundancy Reduction Results
3TCL
Cluster # 10505 Members. Sequence cutoff: 90% Cluster size: 3 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
Select for download / view details OR: Select two chains for comparison
  Download      Details  
1 3TCL 1 A, H CH04 Heavy Chain Fab 9606  
2 3U46 1 A, H CH04 Heavy chain Fab 9606  
3 3U4B 1 H CH04 Heavy chain 9606  
 
Sequence Clusters for the Sequence Entities in PDB 3TCL
Entity #1: Chains: A,H - CH04 Heavy Chain Fab protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 11055
95% 1 3 10659
90% 1 3 10505
70% 245 1480 2
50% 499 3070 1
40% 499 3071 1
30% 540 3629 1
Entity #2: Chains: B,L - CH04 Light Chain Fab protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 30209
95% 1 1 23268
90% 52 365 4
70% 204 1291 3
50% 500 3070 1
40% 500 3071 1
30% 541 3629 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.