Sequence Similarity Clusters for the Entities in PDB 3SZQ

Entity #1 | Chains: A
Aprataxin-like protein protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 10801
95 % 6 6 3989
90 % 6 6 4019
70 % 6 6 3958
50 % 6 6 3819
40 % 6 6 3650
30 % 6 6 3375
Entity #2 | Chains: B
5'-D(*CP*CP*CP*TP*G)-3' dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
5'-D(*TP*AP*TP*CP*GP*GP*AP*AP*TP*CP*AP*GP*GP*G)-3' dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.