Sequence Similarity Clusters for the Entities in PDB 3SY7

Entity #1 | Chains: A
Porin D protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52627
95 % 1 3 16104 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 3 15794
70 % 1 3 14755
50 % 1 3 13010
40 % 5 22 1457
30 % 7 27 1232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.