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An Information Portal to 110071 Biological Macromolecular Structures

Crystal structure of the beta2 adrenergic receptor-Gs protein complex
Sequence Clustering and Redundancy Reduction Results
3SN6
Sequence Clusters for the Sequence Entities in PDB 3SN6
Entity #1: Chains: A - Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 43188
95% 16 18 2540
90% 16 18 2570
70% 16 18 2594
50% 16 18 2570
40% 77 89 292
30% 79 91 295
Entity #2: Chains: B - Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 19 1599
95% 21 24 1638
90% 21 24 1679
70% 21 24 1702
50% 22 25 1611
40% 22 27 1521
30% 22 27 1470
Entity #3: Chains: G - Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 17 2365
95% 14 17 2988
90% 14 17 3030
70% 14 17 3042
50% 14 17 2994
40% 14 17 2914
30% 14 17 2717
Entity #4: Chains: R - Lysozyme, Beta-2 adrenergic receptor protein, length: 514 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41308
95% 1 1 30648
90% 4 5 10745
70% 4 5 10149
50% 4 5 9143
40% 4 5 8337
30% 4 5 7332
Entity #5: Chains: N - Camelid antibody VHH fragment protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 53536
95% 1 1 37052
90% 1 1 35388
70% 207 224 25
50% 330 373 11
40% 575 655 9
30% 648 766 8
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.