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Crystal structure of the beta2 adrenergic receptor-Gs protein complex
Sequence Clustering and Redundancy Reduction Results
3SN6
Sequence Clusters for the Sequence Entities in PDB 3SN6
Entity #1: Chains: A - Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 40437
95% 16 18 2286
90% 16 18 2315
70% 16 18 2348
50% 16 18 2377
40% 75 86 273
30% 77 88 285
Entity #2: Chains: B - Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 19 1420
95% 21 24 1452
90% 21 24 1493
70% 21 24 1534
50% 22 25 1471
40% 22 26 1442
30% 22 26 1401
Entity #3: Chains: G - Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 17 2132
95% 14 17 2711
90% 14 17 2760
70% 14 17 2781
50% 14 17 2794
40% 14 17 2734
30% 14 17 2547
Entity #4: Chains: R - Lysozyme, Beta-2 adrenergic receptor protein, length: 514 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 38680
95% 1 1 28803
90% 4 5 10148
70% 4 5 9607
50% 4 5 8670
40% 4 5 7904
30% 4 5 6987
Entity #5: Chains: N - Camelid antibody VHH fragment protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 50339
95% 1 1 34939
90% 1 1 33420
70% 182 197 30
50% 294 330 14
40% 524 592 8
30% 595 701 9
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.