Sequence Similarity Clusters for the Entities in PDB 3SN6

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50996
95 % 16 18 3075
90 % 16 18 3123
70 % 16 18 3103
50 % 16 18 3030
40 % 80 95 333
30 % 82 97 329
Entity #2 | Chains: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 28 1167
95 % 29 33 1356
90 % 29 33 1376
70 % 29 33 1399
50 % 30 34 1385
40 % 30 36 1324
30 % 30 36 1299
Entity #3 | Chains: G
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 23 1888
95 % 19 23 2464
90 % 19 23 2518
70 % 19 23 2502
50 % 19 23 2462
40 % 19 23 2437
30 % 19 23 2298
Entity #4 | Chains: R
Lysozyme, Beta-2 adrenergic receptor protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48808
95 % 1 1 36010
90 % 4 6 9430
70 % 4 6 8976
50 % 4 6 8153
40 % 4 6 7479
30 % 4 6 6607
Entity #5 | Chains: N
Camelid antibody VHH fragment protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62722
95 % 1 1 43199
90 % 1 1 41063
70 % 282 326 12
50 % 418 509 8
40 % 696 848 5
30 % 779 974 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.