Sequence Similarity Clusters for the Entities in PDB 3SN6

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48045
95 % 16 18 2850
90 % 16 18 2898
70 % 16 18 2896
50 % 16 18 2845
40 % 80 94 313
30 % 82 96 308
Entity #2 | Chains: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1373
95 % 26 29 1485
90 % 26 29 1517
70 % 26 29 1554
50 % 27 30 1504
40 % 27 32 1436
30 % 27 32 1408
Entity #3 | Chains: G
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 2014
95 % 18 21 2599
90 % 18 21 2645
70 % 18 21 2633
50 % 18 21 2606
40 % 18 21 2587
30 % 18 21 2424
Entity #4 | Chains: R
Lysozyme, Beta-2 adrenergic receptor protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45957
95 % 1 1 33943
90 % 4 6 8879
70 % 4 6 8456
50 % 4 6 7704
40 % 4 6 7098
30 % 4 6 6299
Entity #5 | Chains: N
Camelid antibody VHH fragment protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59294
95 % 1 1 40888
90 % 1 1 38926
70 % 252 284 20
50 % 388 456 8
40 % 656 774 5
30 % 738 899 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.