Sequence Similarity Clusters for the Entities in PDB 3SN6

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48434
95 % 16 18 2875
90 % 16 18 2920
70 % 16 18 2920
50 % 16 18 2867
40 % 80 94 314
30 % 82 96 310
Entity #2 | Chains: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 1384
95 % 26 29 1502
90 % 26 29 1538
70 % 26 29 1569
50 % 27 30 1515
40 % 27 32 1449
30 % 27 32 1421
Entity #3 | Chains: G
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 21 2030
95 % 18 21 2622
90 % 18 21 2664
70 % 18 21 2655
50 % 18 21 2629
40 % 18 21 2612
30 % 18 21 2447
Entity #4 | Chains: R
Lysozyme, Beta-2 adrenergic receptor protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46343
95 % 1 1 34204
90 % 4 6 8942
70 % 4 6 8518
50 % 4 6 7762
40 % 4 6 7144
30 % 4 6 6335
Entity #5 | Chains: N
Camelid antibody VHH fragment protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59738
95 % 1 1 41164
90 % 1 1 39188
70 % 252 285 20
50 % 387 461 8
40 % 655 785 5
30 % 737 910 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.