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Crystal structure of the beta2 adrenergic receptor-Gs protein complex
Sequence Clustering and Redundancy Reduction Results
3SN6
Sequence Clusters for the Sequence Entities in PDB 3SN6
Entity #1: Chains: A - Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 42635
95% 16 18 2508
90% 16 18 2535
70% 16 18 2557
50% 16 18 2537
40% 77 89 288
30% 79 91 294
Entity #2: Chains: B - Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 19 1580
95% 21 24 1609
90% 21 24 1651
70% 21 24 1674
50% 22 25 1588
40% 22 27 1502
30% 22 27 1456
Entity #3: Chains: G - Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 17 2327
95% 14 17 2943
90% 14 17 2983
70% 14 17 2993
50% 14 17 2953
40% 14 17 2879
30% 14 17 2684
Entity #4: Chains: R - Lysozyme, Beta-2 adrenergic receptor protein, length: 514 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 40778
95% 1 1 30286
90% 4 5 10621
70% 4 5 10041
50% 4 5 9055
40% 4 5 8260
30% 4 5 7271
Entity #5: Chains: N - Camelid antibody VHH fragment protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 52887
95% 1 1 36634
90% 1 1 34992
70% 205 222 25
50% 323 366 11
40% 563 643 9
30% 636 754 8
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.