Sequence Similarity Clusters for the Entities in PDB 3SN6

Entity #1 | Chains: A
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 33581
95 % 16 20 2859
90 % 16 20 2903
70 % 16 20 2875
50 % 16 20 2845
40 % 80 97 354
30 % 82 99 342
Entity #2 | Chains: B
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein, length: 351 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 30 1158
95 % 29 35 1338
90 % 29 35 1363
70 % 29 35 1381
50 % 30 36 1360
40 % 30 38 1310
30 % 30 38 1287
Entity #3 | Chains: G
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 25 1714
95 % 19 25 2255
90 % 19 25 2321
70 % 19 25 2321
50 % 19 25 2302
40 % 19 25 2286
30 % 19 25 2186
Entity #4 | Chains: R
Endolysin,Beta-2 adrenergic receptor protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50729
95 % 1 1 37437
90 % 4 6 9859
70 % 4 6 9383
50 % 4 6 8500
40 % 4 6 7789
30 % 4 6 6879
Entity #5 | Chains: N
Camelid antibody VHH fragment protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28530
95 % 1 3 23677
90 % 1 3 22909
70 % 308 355 9
50 % 451 549 8
40 % 734 897 5
30 % 817 1023 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.