Sequence Similarity Clusters for the Entities in PDB 3S6I

Entity #1 | Chains: A,D
DNA-3-methyladenine glycosylase 1 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31503
95 % 1 1 27321 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 26301
70 % 1 1 23774
50 % 1 1 20390
40 % 1 1 18006
30 % 1 1 15093
Entity #2 | Chains: B,E
(5'-D(*TP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*T)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
(5'-D(*AP*AP*GP*AP*CP*TP*TP*GP*GP*AP*C)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures