Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51001
95 % 1 1 36372
90 % 2 2 19440
70 % 7 7 7582
50 % 7 7 6929
40 % 11 11 4395
30 % 11 11 4018
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24388
95 % 2 3 16144
90 % 2 3 15821
70 % 396 1932 1
50 % 811 3985 1
40 % 811 3986 1
30 % 882 4715 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 11412
95 % 2 4 11067
90 % 2 4 10901
70 % 327 1639 3
50 % 812 3985 1
40 % 812 3986 1
30 % 883 4715 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.