Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49635
95 % 1 1 35429
90 % 2 2 18926
70 % 7 7 7347
50 % 7 7 6730
40 % 11 11 4272
30 % 11 11 3909
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23681
95 % 2 3 15704
90 % 2 3 15388
70 % 376 1850 1
50 % 771 3813 1
40 % 771 3814 1
30 % 842 4537 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 11008
95 % 2 4 10692
90 % 2 4 10533
70 % 309 1568 3
50 % 772 3813 1
40 % 772 3814 1
30 % 843 4537 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.