Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49946
95 % 1 1 35642
90 % 2 2 19037
70 % 7 7 7403
50 % 7 7 6774
40 % 11 11 4296
30 % 11 11 3933
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23825
95 % 2 3 15801
90 % 2 3 15484
70 % 381 1866 1
50 % 781 3846 1
40 % 781 3847 1
30 % 852 4574 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 11110
95 % 2 4 10785
90 % 2 4 10617
70 % 314 1583 3
50 % 782 3846 1
40 % 782 3847 1
30 % 853 4574 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.