Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51397
95 % 1 1 36627
90 % 2 2 19581
70 % 7 7 7636
50 % 7 7 6982
40 % 11 11 4432
30 % 11 11 4047
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24584
95 % 2 3 16269
90 % 2 3 15945
70 % 403 1945 1
50 % 825 4012 1
40 % 825 4014 1
30 % 898 4750 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 11505
95 % 2 4 11142
90 % 2 4 10976
70 % 332 1648 3
50 % 826 4012 1
40 % 826 4014 1
30 % 899 4750 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.