Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48513
95 % 1 1 34646
90 % 2 2 18497
70 % 7 7 7188
50 % 7 7 6576
40 % 11 11 4187
30 % 11 11 3823
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23114
95 % 2 3 15329
90 % 2 3 15015
70 % 358 1782 1
50 % 735 3677 1
40 % 735 3678 1
30 % 803 4338 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 10709
95 % 2 4 10422
90 % 2 4 10270
70 % 295 1519 3
50 % 736 3677 1
40 % 736 3678 1
30 % 804 4338 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.