Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54450
95 % 1 1 38806
90 % 2 2 20785
70 % 7 7 8141
50 % 7 7 7416
40 % 11 11 4686
30 % 11 11 4263
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26152
95 % 2 3 17308
90 % 2 3 16954
70 % 440 2145 1
50 % 905 4435 1
40 % 905 4435 1
30 % 991 5225 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 12312
95 % 2 4 11849
90 % 2 4 11662
70 % 363 1803 2
50 % 906 4435 1
40 % 906 4435 1
30 % 992 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.