Sequence Similarity Clusters for the Entities in PDB 3RU8

Entity #1 | Chains: X
Epitope Scaffold 2bodx43 protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50678
95 % 1 1 36131
90 % 2 2 19320
70 % 7 7 7521
50 % 7 7 6882
40 % 11 11 4368
30 % 11 11 4000
Entity #2 | Chains: H
Antibody b12, Heavy Chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24220
95 % 2 3 16038
90 % 2 3 15713
70 % 389 1912 1
50 % 797 3940 1
40 % 797 3941 1
30 % 868 4669 1
Entity #3 | Chains: L
Antibody b12, Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 11329
95 % 2 4 10986
90 % 2 4 10820
70 % 320 1620 3
50 % 798 3940 1
40 % 798 3941 1
30 % 869 4669 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.