Sequence Similarity Clusters for the Entities in PDB 3RTM

Entity #1 | Chains: A
Beta-secretase 1 protein, length: 411 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 269 277 25
95 % 355 365 15 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 355 365 16
70 % 355 365 24
50 % 365 377 41
40 % 365 377 56
30 % 1078 1116 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures