Sequence Similarity Clusters for the Entities in PDB 3RRT

Entity #1 | Chains: A,C,E
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3135
95 % 8 8 3877 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.4
PDBFlex
90 % 8 8 3920
70 % 8 8 3869
50 % 8 8 3760
40 % 8 8 3618
30 % 8 8 3390
Entity #2 | Chains: B,D,F
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4785
95 % 2 3 5548 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 5566
70 % 2 3 5484
50 % 2 3 5200
40 % 2 3 4907
30 % 9 10 2177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures