Sequence Similarity Clusters for the Entities in PDB 3RRT

Entity #1 | Chains: A,C,E
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3075
95 % 8 8 3819 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.4
PDBFlex
90 % 8 8 3862
70 % 8 8 3814
50 % 8 8 3710
40 % 8 8 3572
30 % 8 8 3347
Entity #2 | Chains: B,D,F
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4705
95 % 2 3 5470 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 5488
70 % 2 3 5409
50 % 2 3 5126
40 % 2 3 4840
30 % 9 10 2141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.