Sequence Similarity Clusters for the Entities in PDB 3RRT

Entity #1 | Chains: A,C,E
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3579
95 % 8 8 3930 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.4
PDBFlex
90 % 8 8 3986
70 % 8 8 3911
50 % 8 8 3810
40 % 8 8 3620
30 % 8 8 3319
Entity #2 | Chains: B,D,F
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 6255
95 % 2 3 6410 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 6398
70 % 2 3 6216
50 % 2 3 5806
40 % 2 3 5407
30 % 3 4 3230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures