Sequence Similarity Clusters for the Entities in PDB 3RRT

Entity #1 | Chains: A,C,E
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3202
95 % 8 8 3964 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.4
PDBFlex
90 % 8 8 4014
70 % 8 8 3963
50 % 8 8 3850
40 % 8 8 3697
30 % 8 8 3459
Entity #2 | Chains: B,D,F
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4910
95 % 2 3 5670 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 3 5693
70 % 2 3 5599
50 % 2 3 5301
40 % 2 3 4995
30 % 9 10 2234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures