Sequence Similarity Clusters for the Entities in PDB 3RRR

Entity #1 | Chains: A,C,E,G,I,M
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3161
95 % 4 8 3906 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.4
PDBFlex
90 % 4 8 3949
70 % 4 8 3900
50 % 4 8 3788
40 % 4 8 3647
30 % 4 8 3413
Entity #2 | Chains: B,D,F,H,L,N
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4817
95 % 1 3 5582 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 5599
70 % 1 3 5514
50 % 1 3 5230
40 % 1 3 4936
30 % 4 10 2200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures