Sequence Similarity Clusters for the Entities in PDB 3RRR

Entity #1 | Chains: A,C,E,G,I,M
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3100
95 % 4 8 3843 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.4
PDBFlex
90 % 4 8 3888
70 % 4 8 3840
50 % 4 8 3731
40 % 4 8 3593
30 % 4 8 3365
Entity #2 | Chains: B,D,F,H,L,N
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4736
95 % 1 3 5495 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 5513
70 % 1 3 5433
50 % 1 3 5153
40 % 1 3 4867
30 % 4 10 2156

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures