Sequence Similarity Clusters for the Entities in PDB 3RRR

Entity #1 | Chains: A,C,E,G,I,M
Fusion glycoprotein F0 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3039
95 % 4 8 3787 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.3
PDBFlex
90 % 4 8 3827
70 % 4 8 3789
50 % 4 8 3692
40 % 4 8 3555
30 % 4 8 3326
Entity #2 | Chains: B,D,F,H,L,N
Fusion glycoprotein F0 protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4653
95 % 1 3 5417 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 5431
70 % 1 3 5363
50 % 1 3 5086
40 % 1 3 4800
30 % 4 10 2127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.