Sequence Similarity Clusters for the Entities in PDB 3RMN

Entity #1 | Chains: L
Thrombin Light Chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 78 335 45
95 % 78 336 60 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 78 336 65
70 % 78 338 76
50 % 78 338 100
40 % 78 338 124
30 % 78 338 135
Entity #2 | Chains: H
Thrombin Heavy Chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 69 290 55
95 % 82 374 35 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.6
PDBFlex
90 % 82 381 38
70 % 82 405 43
50 % 82 405 78
40 % 551 1682 4
30 % 576 1831 6
Entity #3 | Chains: I
Hirudin variant-2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.