Sequence Similarity Clusters for the Entities in PDB 3RMM

Entity #1 | Chains: L
Thrombin Light Chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 321 40
95 % 39 322 55
90 % 39 322 59
70 % 39 324 68
50 % 39 324 92
40 % 39 324 114
30 % 39 324 128
Entity #2 | Chains: H
Thrombin Heavy Chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 277 50
95 % 39 360 19
90 % 39 367 21
70 % 39 391 26
50 % 39 391 45
40 % 250 1567 3
30 % 261 1707 6
Entity #3 | Chains: I
Hirudin variant-2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.