Sequence Similarity Clusters for the Entities in PDB 3RKK

Entity #1 | Chains: A,B
Beta-lactamase NDM-1 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 27 642
95 % 37 39 562 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.0
PDBFlex
90 % 41 43 532
70 % 41 43 573
50 % 41 43 619
40 % 41 43 651
30 % 180 195 154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.