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An Information Portal to 105025 Biological Macromolecular Structures

Human topoisomerase IIbeta in complex with DNA and etoposide
Sequence Clustering and Redundancy Reduction Results
3QX3
Sequence Clusters for the Sequence Entities in PDB 3QX3
Entity #1: Chains: A,B - DNA topoisomerase 2-beta protein, length: 803 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 4227
95% 1 5 4841
90% 1 5 4859
70% 1 6 4529
50% 1 6 4333
40% 1 11 2781
30% 1 11 2592
Entity #2: Chains: C,E - DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3') dna, length: 8 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D,F - DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3') dna, length: 12 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.