Sequence Similarity Clusters for the Entities in PDB 3QVG

Entity #1 | Chains: A,C
DNA ligase 3 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 21282
95 % 2 5 8697
90 % 2 5 8612
70 % 2 5 8200
50 % 2 5 7473
40 % 2 5 6876
30 % 2 5 6099
Entity #2 | Chains: B,D
DNA repair protein XRCC1 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41483
95 % 2 3 11708
90 % 2 4 9380
70 % 2 4 8905
50 % 2 4 8122
40 % 2 4 7468
30 % 2 4 6628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.