Sequence Similarity Clusters for the Entities in PDB 3QNJ

Entity #1 | Chains: A,B
Chaperone protein DnaK protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 600
95 % 29 35 743 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.9
PDBFlex
90 % 29 35 773
70 % 29 35 818
50 % 29 35 863
40 % 31 39 827
30 % 31 39 814
Entity #2 | Chains: C,D
antimicrobial peptide oncocin protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures