Sequence Similarity Clusters for the Entities in PDB 3QNF

Entity #1 | Chains: A,B,C
Endoplasmic reticulum aminopeptidase 1 protein, length: 954 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18642
95 % 3 3 11036 Flexibility: Medium
Max RMSD: 7.0, Avg RMSD: 3.6
PDBFlex
90 % 3 3 10881
70 % 3 3 10325
50 % 10 11 2857
40 % 13 16 1901
30 % 42 46 854

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures