Sequence Similarity Clusters for the Entities in PDB 3QNF

Entity #1 | Chains: A,B,C
Endoplasmic reticulum aminopeptidase 1 protein, length: 954 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16952
95 % 3 3 10413 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 2.8
PDBFlex
90 % 3 3 10286
70 % 3 3 9754
50 % 10 11 2727
40 % 13 16 1798
30 % 41 45 817

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures