Sequence Similarity Clusters for the Entities in PDB 3QNF

Entity #1 | Chains: A,B,C
Endoplasmic reticulum aminopeptidase 1 protein, length: 954 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17408
95 % 3 3 10341 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 2.8
PDBFlex
90 % 3 3 10198
70 % 3 3 9663
50 % 10 11 2696
40 % 13 16 1764
30 % 42 46 795

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures