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An Information Portal to 108263 Biological Macromolecular Structures

X-ray structure of the complex between human alpha thrombin and a modified thrombin binding aptamer (mTBA)
Sequence Clustering and Redundancy Reduction Results
3QLP
Sequence Clusters for the Sequence Entities in PDB 3QLP
Entity #1: Chains: H - Thrombin heavy chain protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 173 262 28
95% 220 345 18
90% 222 352 19
70% 223 376 23
50% 223 376 29
40% 1035 1501 3
30% 1115 1630 6
Entity #2: Chains: L - Thrombin light chain protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 195 306 14
95% 195 307 21
90% 195 307 26
70% 195 309 36
50% 195 309 51
40% 195 309 67
30% 195 309 91
Entity #3: Chains: D - modified thrombin binding DNA aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.