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X-ray structure of the complex between human alpha thrombin and a modified thrombin binding aptamer (mTBA)
Sequence Clustering and Redundancy Reduction Results
3QLP
Sequence Clusters for the Sequence Entities in PDB 3QLP
Entity #1: Chains: H - Thrombin heavy chain protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 173 262 16
95% 218 343 18
90% 220 350 19
70% 221 374 22
50% 221 374 25
40% 1007 1465 3
30% 1081 1581 5
Entity #2: Chains: L - Thrombin light chain protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 194 305 13
95% 194 306 20
90% 194 306 24
70% 194 308 31
50% 194 308 46
40% 194 308 63
30% 194 308 87
Entity #3: Chains: D - modified thrombin binding DNA aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.