Sequence Similarity Clusters for the Entities in PDB 3QLP

Entity #1 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 187 277 45
95 % 234 360 19
90 % 236 367 20
70 % 237 391 25
50 % 237 391 43
40 % 1084 1561 3
30 % 1168 1697 6
Entity #2 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 321 21
95 % 209 322 29
90 % 209 322 35
70 % 209 324 39
50 % 209 324 79
40 % 209 324 104
30 % 209 324 120
Entity #3 | Chains: D
modified thrombin binding DNA aptamer dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.