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An Information Portal to 110071 Biological Macromolecular Structures

X-ray structure of the complex between human alpha thrombin and a modified thrombin binding aptamer (mTBA)
Sequence Clustering and Redundancy Reduction Results
3QLP
Sequence Clusters for the Sequence Entities in PDB 3QLP
Entity #1: Chains: H - Thrombin heavy chain protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 174 263 44
95% 221 346 18
90% 223 353 19
70% 224 377 24
50% 224 377 40
40% 1046 1515 3
30% 1126 1644 6
Entity #2: Chains: L - Thrombin light chain protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 196 307 14
95% 196 308 22
90% 196 308 27
70% 196 310 38
50% 196 310 75
40% 196 310 96
30% 196 310 113
Entity #3: Chains: D - modified thrombin binding DNA aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.