Sequence Similarity Clusters for the Entities in PDB 3QLP

Entity #1 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 191 283 53
95 % 239 367 35
90 % 241 374 36
70 % 242 398 41
50 % 242 398 75
40 % 1128 1617 4
30 % 1217 1759 6
Entity #2 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 214 328 43
95 % 214 329 58
90 % 214 329 63
70 % 214 331 74
50 % 214 331 100
40 % 214 331 124
30 % 214 331 135
Entity #3 | Chains: D
modified thrombin binding DNA aptamer dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.