Sequence Similarity Clusters for the Entities in PDB 3QDK

Entity #1 | Chains: A,B,C,D
Ribulokinase protein, length: 572 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17185
95 % 1 1 15869 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 1 15576
70 % 1 1 14612
50 % 1 1 12946
40 % 1 1 11715
30 % 1 1 10190

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures