POP-OUT | CLOSE
 
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lex
Sequence Clustering and Redundancy Reduction Results
3Q6R
Cluster # 1835 Members. Sequence cutoff: 95% Cluster size: 11 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
Select for download / view details OR: Select two chains for comparison
  Download      Details  
1 3Q39 1 A, B Capsid protein unp reisdues 224-538 11983  
2 3Q38 1 A, B Capsid protein unp reisdues 224-538 11983  
3 3RY8 1 A, B Capsid protein P domain (UNP residues 225-538) 11983  
4 3ONU 1 A, B Capsid protein P domain (UNP residues 225-538) 11983  
5 3Q6R 1 A, B Capsid protein unp residues 225-538 11983  
6 3Q3A 1 A, B Capsid protein unp residues 224-538 11983  
7 3Q6Q 1 A, B Capsid protein unp residues 225-538 11983  
8 3PA1 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983  
9 3PA2 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983  
10 3ONY 1 A, B, C Capsid protein P domain (UNP residues 225-538) 11983  
11 3V7A 3 A, B Capsid P domain residues 224-538 150080  
 
Sequence Clusters for the Sequence Entities in PDB 3Q6R
Entity #1: Chains: A,B - Capsid protein protein, length: 319 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 11 1359
95% 5 11 1835
90% 5 11 1866
70% 5 13 1645
50% 5 25 473
40% 5 25 500
30% 6 44 303
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.