POP-OUT | CLOSE

An Information Portal to 111558 Biological Macromolecular Structures

Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lex
Sequence Clustering and Redundancy Reduction Results
3Q6R
Cluster # 695 Members. Sequence cutoff: 100% Cluster size: 21 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
Select for download / view details OR: Select two chains for comparison
  Download      Details  
1 3Q39 1 A, B Capsid protein unp reisdues 224-538 11983  
2 3Q38 1 A, B Capsid protein unp reisdues 224-538 11983  
3 3RY8 1 A, B Capsid protein P domain (UNP residues 225-538) 11983  
4 3ONU 1 A, B Capsid protein P domain (UNP residues 225-538) 11983  
5 3Q6R 1 A, B Capsid protein unp residues 225-538 11983  
6 3Q3A 1 A, B Capsid protein unp residues 224-538 11983  
7 3Q6Q 1 A, B Capsid protein unp residues 225-538 11983  
8 3PA1 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983  
9 3PA2 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983  
10 4X7F 1 A, B Capsid protein VHH, UNP residues 224-538 11983  
11 4Z4R 1 A, B Capsid protein Protruding domain, UNP residues 224-538 747305  
12 4Z4Y 1 A, B Capsid protein Protruding domain, UNP residues 224-538 747305  
13 4Z4S 1 A, B Capsid protein Protruding domain, UNP residues 224-538 747305  
14 4Z4T 1 A, B Capsid protein UNP residues 224-538 11983  
15 4Z4V 1 A, B Capsid protein Protruding domain, UNP residues 224-538 747305  
16 4Z4W 1 A, B Capsid protein Protruding domain, UNP residues 224-538 747305  
17 4Z4Z 1 A, B Capsid protein residues 224-538 11983  
18 3ONY 1 A, B, C Capsid protein P domain (UNP residues 225-538) 11983  
19 4Z4U 1 A, B Capsid protein UNP residues 224-538 747305  
20 4X7E 1 A, B Capsid protein UNP residues 224-538 11983  
21 3V7A 3 A, B Capsid P domain residues 224-538 150080  
 
Sequence Clusters for the Sequence Entities in PDB 3Q6R
Entity #1: Chains: A,B - Capsid protein protein, length: 319 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 21 695
95% 5 21 964
90% 5 21 990
70% 5 23 974
50% 9 54 265
40% 9 54 289
30% 11 80 214
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.