Sequence Similarity Clusters for the Entities in PDB 3Q6Q

Entity #1 | Chains: A,B
Capsid protein protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 31 715
95 % 8 31 876 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 8 31 904
70 % 9 46 615
50 % 19 90 247
40 % 23 117 209
30 % 23 122 221

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3Q39 1 A, B Capsid protein unp reisdues 224-538 11983
2 3Q38 1 A, B Capsid protein unp reisdues 224-538 11983
3 5HZA 1 A, B Capsid protein 11983
4 3RY8 1 A, B Capsid protein P domain (UNP residues 225-538) 11983
5 3ONU 1 A, B Capsid protein P domain (UNP residues 225-538) 11983
6 3Q6R 1 A, B Capsid protein unp residues 225-538 11983
7 3Q3A 1 A, B Capsid protein unp residues 224-538 11983
8 3Q6Q 1 A, B Capsid protein unp residues 225-538 11983
9 3PA1 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983
10 3PA2 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983
11 5HZB 1 A, B Capsid protein 11983
12 5BSY 1 A, B Capsid protein protruding domain, residues 224-538 11983
13 4X7F 1 A, B Capsid protein VHH, UNP residues 224-538 11983
14 5OMM 1 A, B Capsid protein Protruding domain, UNP residues 224-538 11983
15 4Z4R 1 A, B Capsid protein Protruding domain, UNP residues 224-538 11983
16 4Z4Y 1 A, B Capsid protein Protruding domain, UNP residues 224-538 11983
17 4Z4S 1 A, B Capsid protein Protruding domain, UNP residues 224-538 11983
18 4Z4T 1 A, B Capsid protein UNP residues 224-538 11983
19 4Z4V 1 A, B Capsid protein Protruding domain, UNP residues 224-538 11983
20 4Z4W 1 A, B Capsid protein Protruding domain, UNP residues 224-538 11983
21 4Z4Z 1 A, B Capsid protein residues 224-538 11983
22 5BSX 1 A, B Capsid protein protruding domain, residues 224-538 11983
23 3ONY 1 A, B, C Capsid protein P domain (UNP residues 225-538) 11983
24 4Z4U 1 A, B Capsid protein UNP residues 224-538 11983
25 6GY9 1 A, B Capsid protein 11983
26 5O05 2 A, B Capsid protein 11983
27 4X7E 1 A, B Capsid protein UNP residues 224-538 11983
28 5O03 1 A, B Capsid protein 11983
29 5O04 1 A, B Capsid protein 11983
30 5OMN 1 B Capsid protein 11983
31 3V7A 3 A, B Capsid P domain residues 224-538 11983