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Crystal structure of the Salmonella transcriptional regulator SlyA in complex with DNA
Sequence Clustering and Redundancy Reduction Results
3Q5F
Sequence Clusters for the Sequence Entities in PDB 3Q5F
Entity #1: Chains: A,B - Transcriptional regulator slyA protein, length: 147 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 22590
95% 2 2 18879
90% 2 2 18314
70% 5 5 3983
50% 5 5 3857
40% 5 5 3677
30% 5 5 3386
Entity #2: Chains: C - DNA (5'-D(*AP*AP*TP*AP*AP*CP*TP*TP*AP*GP*CP*AP*AP*GP*CP*TP*AP*AP*TP*TP*AP*TP*A)-3') dna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: D - DNA (5'-D(*TP*TP*AP*TP*AP*AP*TP*TP*AP*GP*CP*TP*TP*GP*CP*TP*AP*AP*GP*TP*TP*AP*T)-3') dna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.