Sequence Similarity Clusters for the Entities in PDB 3Q5E

Entity #1 | Chains: A,C,E,G
Atlastin-1 protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 3948
95 % 9 11 2088 Flexibility: Medium
Max RMSD: 21.5, Avg RMSD: 9.4
PDBFlex
90 % 9 11 2137
70 % 9 11 2149
50 % 10 12 1981
40 % 10 12 1989
30 % 10 12 1914

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures