Sequence Similarity Clusters for the Entities in PDB 3Q5E

Entity #1 | Chains: A,C,E,G
Atlastin-1 protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4859
95 % 9 11 2249 Flexibility: High
Max RMSD: 21.5, Avg RMSD: 10.4
PDBFlex
90 % 9 11 2306
70 % 9 11 2304
50 % 10 12 2130
40 % 10 12 2104
30 % 10 12 1987

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures