Sequence Similarity Clusters for the Entities in PDB 3Q5E

Entity #1 | Chains: A,C,E,G
Atlastin-1 protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4005
95 % 9 11 2113 Flexibility: Medium
Max RMSD: 21.5, Avg RMSD: 9.4
PDBFlex
90 % 9 11 2164
70 % 9 11 2172
50 % 10 12 2010
40 % 10 12 2011
30 % 10 12 1937

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures