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Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type H2 (triglycan)
Sequence Clustering and Redundancy Reduction Results
3Q3A
Cluster # 303 Members. Sequence cutoff: 30% Cluster size: 44 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 3Q39 1 A, B Capsid protein unp reisdues 224-538 11983  
2 3Q38 1 A, B Capsid protein unp reisdues 224-538 11983  
3 3RY8 1 A, B Capsid protein P domain (UNP residues 225-538) 11983  
4 2ZL7 1 A, B 58 kd capsid protein P-domain 11983  
5 3ONU 1 A, B Capsid protein P domain (UNP residues 225-538) 11983  
6 3Q6R 1 A, B Capsid protein unp residues 225-538 11983  
7 3Q3A 1 A, B Capsid protein unp residues 224-538 11983  
8 4P25 1 A, B, C, D Major capsid protein 1097017  
9 3Q6Q 1 A, B Capsid protein unp residues 225-538 11983  
10 2ZL6 1 A, B 58 kd capsid protein P-domain 11983  
11 3AST 1 A, B Capsid protein UNP RESIDUES 221-541 95340  
12 2ZL5 1 A, B 58 kd capsid protein P-domain 11983  
13 3PA1 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983  
14 4P1V 1 A, B, C, D P domain of VPI 1097017  
15 3PA2 1 A, B Capsid protein P-domain-026 (UNP residues 224 to 538) 11983  
16 4P12 1 A, B, C, D Major capsid protein 1097017  
17 3ASQ 1 A, B Capsid protein UNP RESIDUES 221-541 95340  
18 3ASP 1 A, B Capsid protein UNP RESIDUES 221-541 95340  
19 3ASS 1 A, B Capsid protein UNP RESIDUES 221-541 95340  
20 4P3I 1 A, B, C, D P domain of VP1 1097017  
21 4P2N 1 A, B, C, D Major capsid protein UNP residues 226-526 1097017  
22 3ASR 1 A, B Capsid protein UNP RESIDUES 221-541 95340  
23 3R6K 1 A VP1 protein unp residues 225-525 95340  
24 3R6J 1 A VP1 protein unp residues 225-525 95340  
25 3ONY 1 A, B, C Capsid protein P domain (UNP residues 225-538) 11983  
26 4P26 1 A, B, C, D P domain of VP1 1097017  
27 3PVD 1 A, B Capsid P DOMAIN, UNP residues 222-537 165510  
28 3LQ6 1 A, B Capsid protein Protruding (P) Domain, residues 228-540 223997  
29 3PUN 1 A, B Capsid P DOMAIN, UNP residues 222-537 165510  
30 3SJP 1 A Capsid Protruding Domain (UNP Residues 221-531) 311380  
31 2OBT 1 A Capsid protein P Domain 142786  
32 3LQE 1 A Capsid protein Protruding (P) Domain, residues 228-540 223997  
33 2OBS 1 A Capsid protein P Domain 142786  
34 2OBR 1 A Capsid protein P Domain 142786  
35 3PUM 1 A, B Capsid P DOMAIN, UNP residues 222-537 165510  
36 3D26 1 A, B 58 kd capsid protein UNP residues 230-530 11983  
37 3SLD 1 A, B, C, D, E, F, G, H, I, J Capsid Protruding Domain (UNP Residues 221-531) 311380  
38 3BY2 1 A 58 kd capsid protein UNP residues 218-522 11983  
39 3BY1 1 A 58 kd capsid protein UNP residues 218-530 11983  
40 3SLN 1 A, B, C, D, E, F, G, H, I, J Capsid Protruding Domain (UNP Residues 221-531) 311380  
41 3SEJ 1 A, B, C, D, E, F, G, H, I, J Capsid Protruding Domain (UNP Residues 221-531) 311380  
42 3BQJ 1 A va387 polypeptide p polypeptide (residues 225-529) 150080  
43 3SKB 1 A, B, C, D, E, F, G, H, I, J Capsid Protruding Domain (UNP Residues 221-531) 311380  
44 3V7A 3 A, B Capsid P domain residues 224-538 150080  
 
Sequence Clusters for the Sequence Entities in PDB 3Q3A
Entity #1: Chains: A,B - Capsid protein protein, length: 319 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 11 1359
95% 6 11 1835
90% 6 11 1866
70% 6 13 1645
50% 6 25 473
40% 6 25 500
30% 7 44 303
 

Documentation

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