Sequence Similarity Clusters for the Entities in PDB 3Q39

Entity #1 | Chains: A,B
Capsid protein protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 30 617
95 % 1 30 831 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.5
PDBFlex
90 % 1 30 865
70 % 1 41 664
50 % 5 82 242
40 % 5 105 202
30 % 5 111 209

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.