Sequence Similarity Clusters for the Entities in PDB 3Q39

Entity #1 | Chains: A,B
Capsid protein protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 25 711
95 % 1 25 978 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.5
PDBFlex
90 % 1 25 1004
70 % 1 35 748
50 % 5 76 255
40 % 5 99 203
30 % 5 105 207

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.